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minor typos
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bschilder committed Mar 21, 2024
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4 changes: 2 additions & 2 deletions reports/CSL.Rmd
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Expand Up @@ -84,7 +84,7 @@ hpo_ids_extended <- unlist(hpo_ids_list) |> unique()

### Import phenotype-cell type association results

Next, I imported the results of our phenotype-cell type association
Next, we imported the results of our phenotype-cell type association
analysis. This analysis was performed using the `MSTExplorer` package
and the results are stored in a data.table.

Expand All @@ -102,7 +102,7 @@ p2g <- HPOExplorer::load_phenotype_to_genes()

## Prioritise targets

We developed a pipeline to help filter down our results to identif the
We developed a pipeline to help filter down our results to identify the
promise promising gene targets for the most severe phenotypes. It
includes a number of different steps, including filtering on cell type
specific gene expression and the evidence supporting the causal
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6 changes: 3 additions & 3 deletions reports/CSL.html
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Expand Up @@ -76823,7 +76823,7 @@ <h1 class="title toc-ignore">Rare Disease Celltyping</h1>
<h3 class="subtitle">CSL Areas of Interest</h3>
<h4 class="author">Brian M. Schilder</h4>
<h4 class="date"><h4><br />
Updated: <i>Mar-20-2024</i><br />
Updated: <i>Mar-21-2024</i><br />
</h4></h4>

</div>
Expand Down Expand Up @@ -76892,7 +76892,7 @@ <h3>Import CSL areas of interest</h3>
</div>
<div id="import-phenotype-cell-type-association-results" class="section level3">
<h3>Import phenotype-cell type association results</h3>
<p>Next, I imported the results of our phenotype-cell type association
<p>Next, we imported the results of our phenotype-cell type association
analysis. This analysis was performed using the <code>MSTExplorer</code>
package and the results are stored in a data.table.</p>
<pre class="r"><code>results &lt;- MSTExplorer::load_example_results()
Expand All @@ -76908,7 +76908,7 @@ <h3>Import phenotype-cell type association results</h3>
</div>
<div id="prioritise-targets" class="section level2">
<h2>Prioritise targets</h2>
<p>We developed a pipeline to help filter down our results to identif
<p>We developed a pipeline to help filter down our results to identify
the promise promising gene targets for the most severe phenotypes. It
includes a number of different steps, including filtering on cell type
specific gene expression and the evidence supporting the causal
Expand Down

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