Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

Sign up for GitHub

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

Addition of zenodo doi #27

Merged
merged 4 commits into from
Apr 4, 2024
Merged

Addition of zenodo doi #27

Show file tree
Hide file tree
Changes from 3 commits
Commits
Show all changes
4 commits
Select commit Hold shift + click to select a range
9a3c7cb
Merge pull request #22 from nf-core/dev
jannikseidelQBiC Mar 26, 2024
e4e3728
Add Zenodo doi
FriederikeHanssen Mar 26, 2024
b108af6
Add Zenodo DOI
FriederikeHanssen Mar 26, 2024
b3c67d6
Update README.md
FriederikeHanssen Apr 3, 2024
File filter

Filter by extension

Filter by extension
Conversations
Failed to load comments.
Loading
Jump to
Jump to file
Failed to load files.
Loading
Diff view
Diff view
5 changes: 2 additions & 3 deletions README.md
View file
Open in desktop
Original file line number Diff line number Diff line change
Expand Up @@ -6,7 +6,7 @@
</h1>

[![GitHub Actions CI Status](https://github.com/nf-core/detaxizer/actions/workflows/ci.yml/badge.svg)](https://github.com/nf-core/detaxizer/actions/workflows/ci.yml)
[![GitHub Actions Linting Status](https://github.com/nf-core/detaxizer/actions/workflows/linting.yml/badge.svg)](https://github.com/nf-core/detaxizer/actions/workflows/linting.yml)[![AWS CI](https://img.shields.io/badge/CI%20tests-full%20size-FF9900?labelColor=000000&logo=Amazon%20AWS)](https://nf-co.re/detaxizer/results)[![Cite with Zenodo](http://img.shields.io/badge/DOI-10.5281/zenodo.XXXXXXX-1073c8?labelColor=000000)](https://doi.org/10.5281/zenodo.XXXXXXX)
[![GitHub Actions Linting Status](https://github.com/nf-core/detaxizer/actions/workflows/linting.yml/badge.svg)](https://github.com/nf-core/detaxizer/actions/workflows/linting.yml)[![AWS CI](https://img.shields.io/badge/CI%20tests-full%20size-FF9900?labelColor=000000&logo=Amazon%20AWS)](https://nf-co.re/detaxizer/results)[![Cite with Zenodo](http://img.shields.io/badge/DOI-10.5281/zenodo.10877147-1073c8?labelColor=000000)](https://doi.org/10.5281/zenodo.10877147)
[![nf-test](https://img.shields.io/badge/unit_tests-nf--test-337ab7.svg)](https://www.nf-test.com)

[![Nextflow](https://img.shields.io/badge/nextflow%20DSL2-%E2%89%A523.04.0-23aa62.svg)](https://www.nextflow.io/)
Expand Down Expand Up @@ -82,8 +82,7 @@ For further information or help, don't hesitate to get in touch on the [Slack `#

## Citations

<!-- TODO nf-core: Add citation for pipeline after first release. Uncomment lines below and update Zenodo doi and badge at the top of this file. -->
<!-- If you use nf-core/detaxizer for your analysis, please cite it using the following doi: [10.5281/zenodo.XXXXXX](https://doi.org/10.5281/zenodo.XXXXXX) -->
If you use nf-core/detaxizer for your analysis, please cite it using the following doi: [10.5281/zenodo.XXXXXX](https://doi.org/10.5281/zenodo.10877147)
Copy link
Contributor

Choose a reason for hiding this comment

The reason will be displayed to describe this comment to others. Learn more.

Hm, wouldnt be

Suggested change
If you use nf-core/detaxizer for your analysis, please cite it using the following doi: [10.5281/zenodo.XXXXXX](https://doi.org/10.5281/zenodo.10877147)
If you use nf-core/detaxizer for your analysis, please cite it using the following doi: [10.5281/zenodo.10877147](https://doi.org/10.5281/zenodo.10877147)

nicer?

Copy link
Collaborator Author

Choose a reason for hiding this comment

The reason will be displayed to describe this comment to others. Learn more.

@FriederikeHanssen Could you update this on master, please? 🙂 And thanks for the support in the release!


An extensive list of references for the tools used by the pipeline can be found in the [`CITATIONS.md`](CITATIONS.md) file.

Expand Down
2 changes: 1 addition & 1 deletion nextflow.config
View file
Open in desktop
Original file line number Diff line number Diff line change
Expand Up @@ -268,7 +268,7 @@ manifest {
mainScript = 'main.nf'
nextflowVersion = '!>=23.04.0'
version = '1.0.0'
doi = ''
doi = '10.5281/zenodo.10877147'
}

// Load modules.config for DSL2 module specific options
Expand Down
Loading