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nf-core/isoseq v1.0.0 - Silver Swan [28/06/2022]
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@sguizard sguizard released this 28 Jun 08:56
· 143 commits to master since this release
1.0.0
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Learn about vigilant mode.

nf-core/isoseq is a bioinformatics best-practice analysis pipeline for Isoseq gene annotation with uLTRA and TAMA.
Starting from raw isoseq subreads, the pipeline:

  • Generates the Circular Consensus Sequences (CSS)
  • Clean and polish CCS to create Full Length Non Chimeric (FLNC) reads
  • Maps FLNCs on the genome
  • Define and clean gene models
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