bump ALL gatk4 modules #2727
Triggered via pull request
November 19, 2024 08:58
matthdsm
Status
Cancelled
Total duration
1h 48m 56s
Artifacts
–
Annotations
21 errors and 1 warning
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conda | 3
The runner has received a shutdown signal. This can happen when the runner service is stopped, or a manually started runner is canceled.
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conda | 3
The operation was canceled.
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conda | 4
The runner has received a shutdown signal. This can happen when the runner service is stopped, or a manually started runner is canceled.
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conda | 4
The operation was canceled.
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docker_self_hosted | 2
The runner has received a shutdown signal. This can happen when the runner service is stopped, or a manually started runner is canceled.
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docker_self_hosted | 2
The operation was canceled.
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singularity | 5
The runner has received a shutdown signal. This can happen when the runner service is stopped, or a manually started runner is canceled.
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singularity | 5
The operation was canceled.
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singularity | 3
The runner has received a shutdown signal. This can happen when the runner service is stopped, or a manually started runner is canceled.
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singularity | 3
The operation was canceled.
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docker_self_hosted | 1
The runner has received a shutdown signal. This can happen when the runner service is stopped, or a manually started runner is canceled.
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docker_self_hosted | 1
The operation was canceled.
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singularity | 2
Process completed with exit code 1.
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docker_self_hosted | 5
Process completed with exit code 1.
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conda | 5
The runner has received a shutdown signal. This can happen when the runner service is stopped, or a manually started runner is canceled.
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conda | 5
The operation was canceled.
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docker_self_hosted | 3
The runner has received a shutdown signal. This can happen when the runner service is stopped, or a manually started runner is canceled.
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docker_self_hosted | 3
The operation was canceled.
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docker_self_hosted | 4
Process completed with exit code 1.
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conda | 2
System.IO.IOException: No space left on device : '/opt/actions-runner/_diag/Worker_20241119-085853-utc.log'
at System.IO.RandomAccess.WriteAtOffset(SafeFileHandle handle, ReadOnlySpan`1 buffer, Int64 fileOffset)
at System.IO.StreamWriter.Flush(Boolean flushStream, Boolean flushEncoder)
at System.Diagnostics.TextWriterTraceListener.Flush()
at GitHub.Runner.Common.HostTraceListener.WriteHeader(String source, TraceEventType eventType, Int32 id)
at System.Diagnostics.TraceSource.TraceEvent(TraceEventType eventType, Int32 id, String message)
at GitHub.Runner.Worker.Worker.RunAsync(String pipeIn, String pipeOut)
at GitHub.Runner.Worker.Program.MainAsync(IHostContext context, String[] args)
System.IO.IOException: No space left on device : '/opt/actions-runner/_diag/Worker_20241119-085853-utc.log'
at System.IO.RandomAccess.WriteAtOffset(SafeFileHandle handle, ReadOnlySpan`1 buffer, Int64 fileOffset)
at System.IO.StreamWriter.Flush(Boolean flushStream, Boolean flushEncoder)
at System.Diagnostics.TextWriterTraceListener.Flush()
at GitHub.Runner.Common.HostTraceListener.WriteHeader(String source, TraceEventType eventType, Int32 id)
at System.Diagnostics.TraceSource.TraceEvent(TraceEventType eventType, Int32 id, String message)
at GitHub.Runner.Common.Tracing.Error(Exception exception)
at GitHub.Runner.Worker.Program.MainAsync(IHostContext context, String[] args)
Unhandled exception. System.IO.IOException: No space left on device : '/opt/actions-runner/_diag/Worker_20241119-085853-utc.log'
at System.IO.RandomAccess.WriteAtOffset(SafeFileHandle handle, ReadOnlySpan`1 buffer, Int64 fileOffset)
at System.IO.StreamWriter.Flush(Boolean flushStream, Boolean flushEncoder)
at System.Diagnostics.TextWriterTraceListener.Flush()
at System.Diagnostics.TraceSource.Flush()
at GitHub.Runner.Common.Tracing.Dispose(Boolean disposing)
at GitHub.Runner.Common.Tracing.Dispose()
at GitHub.Runner.Common.TraceManager.Dispose(Boolean disposing)
at GitHub.Runner.Common.TraceManager.Dispose()
at GitHub.Runner.Common.HostContext.Dispose(Boolean disposing)
at GitHub.Runner.Common.HostContext.Dispose()
at GitHub.Runner.Worker.Program.Main(String[] args)
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conda | 1
Canceling since a higher priority waiting request for 'Run nf-test-6917' exists
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conda | 2
You are running out of disk space. The runner will stop working when the machine runs out of disk space. Free space left: 90 MB
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