Force name order

nf-core · Jan 17, 2025 · 4f5b6a3 · 4f5b6a3
1 parent 57ed737
commit 4f5b6a3
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Showing 3 changed files with 22 additions and 14 deletions.
diff --git a/modules/nf-core/krakenuniq/build/meta.yml b/modules/nf-core/krakenuniq/build/meta.yml
@@ -46,7 +46,7 @@ output:
           description: |
             Groovy Map containing sample information
             e.g. [ id:'test', single_end:false ]
-      - $prefix/:
+      - ${prefix}/:
           type: directory
           description: Directory containing KrakenUniq database
           pattern: "*/"

diff --git a/modules/nf-core/krakenuniq/build/tests/main.nf.test b/modules/nf-core/krakenuniq/build/tests/main.nf.test
@@ -53,8 +53,9 @@ nextflow_process {
             assertAll(
                 { assert process.success },
                 { assert snapshot(
-                        stablefiles,
-                        unstablefiles.sort()
+                        stablefiles.sort(),
+                        unstablefiles.sort(),
+                        process.out.versions
                     ).match()
                 }
             )
@@ -93,8 +94,9 @@ test("sarscov2 - fasta - nocleanup") {
             assertAll(
                 { assert process.success },
                 { assert snapshot(
-                        stablefiles,
-                        unstablefiles.sort()
+                        stablefiles.sort(),
+                        unstablefiles.sort(),
+                        process.out.versions
                     ).match()
                 }
             )

diff --git a/modules/nf-core/krakenuniq/build/tests/main.nf.test.snap b/modules/nf-core/krakenuniq/build/tests/main.nf.test.snap
@@ -51,16 +51,16 @@
     "sarscov2 - fasta - nocleanup": {
         "content": [
             [
-                "genome.fasta:md5,6e9fe4042a72f2345f644f239272b7e6",
-                "taxDB:md5,37ea954363803b13c2c9f6ae36fc81c7",
+                "database.idx:md5,f5298aa4215c956d2f737b5988721a24",
                 "database.jdb:md5,48db5f6bb9b9e9db7f5bbdd0d8bec4a8",
-                "database.kdb.counts:md5,a82149480a435210ec1e870f06b6cdb3",
                 "database.kdb:md5,46542be19979e867075f9e455a314e00",
+                "database.kdb.counts:md5,a82149480a435210ec1e870f06b6cdb3",
                 "database.kraken.tsv:md5,be9bd0cb3a8bea30989e65aa42a73727",
                 "database0.kdb:md5,46542be19979e867075f9e455a314e00",
+                "library-files.txt:md5,8a9817d2de8465eb436aa3aa8696a717",
+                "genome.fasta:md5,6e9fe4042a72f2345f644f239272b7e6",
                 "seqid2taxid.map:md5,fe738f2333d57dde0db32239c04a93b8",
-                "database.idx:md5,f5298aa4215c956d2f737b5988721a24",
-                "library-files.txt:md5,8a9817d2de8465eb436aa3aa8696a717"
+                "taxDB:md5,37ea954363803b13c2c9f6ae36fc81c7"
             ],
             [
                 "database-build.log",
@@ -69,30 +69,36 @@
                 "nodes.dmp",
                 "taxdump.tar.gz",
                 "timestamp"
+            ],
+            [
+                "versions.yml:md5,b7fb6c70957b2e6b6b810757928d0325"
             ]
         ],
         "meta": {
             "nf-test": "0.9.0",
             "nextflow": "24.10.2"
         },
-        "timestamp": "2025-01-17T05:55:17.116431583"
+        "timestamp": "2025-01-17T08:29:04.791324194"
     },
     "sarscov2 - fasta": {
         "content": [
             [
-                "taxDB:md5,37ea954363803b13c2c9f6ae36fc81c7",
+                "database.idx:md5,f5298aa4215c956d2f737b5988721a24",
                 "database.kdb:md5,46542be19979e867075f9e455a314e00",
                 "database0.kdb:md5,46542be19979e867075f9e455a314e00",
-                "database.idx:md5,f5298aa4215c956d2f737b5988721a24"
+                "taxDB:md5,37ea954363803b13c2c9f6ae36fc81c7"
             ],
             [
 
+            ],
+            [
+                "versions.yml:md5,b7fb6c70957b2e6b6b810757928d0325"
             ]
         ],
         "meta": {
             "nf-test": "0.9.0",
             "nextflow": "24.10.2"
         },
-        "timestamp": "2025-01-17T06:35:35.064581371"
+        "timestamp": "2025-01-17T08:28:18.051752599"
     }
 }