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Refactor authors to list of contributors #222

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Jan 27, 2025
Merged

Refactor authors to list of contributors #222

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8fd5000
Refactor authors to list of contributors
heuermh Jan 17, 2025
620d289
Fix lint errors
heuermh Jan 17, 2025
ec89f70
Update affiliations
heuermh Jan 17, 2025
fd3fe4b
Commit suggested change
heuermh Jan 18, 2025
e93a3bd
Fix typo
heuermh Jan 18, 2025
0649f70
Merge branch 'contributors' of https://github.com/heuermh/nf-core-pan…
heuermh Jan 18, 2025
c8a7f9a
Apply suggestions from code review
heuermh Jan 27, 2025
f0d2287
Apply suggestions from code review
heuermh Jan 27, 2025
c9a6ec3
Attempt to fix prettier lint error
heuermh Jan 27, 2025
312e13c
Attempt to fix prettier lint error
heuermh Jan 27, 2025
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6 changes: 3 additions & 3 deletions README.md
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Expand Up @@ -76,15 +76,15 @@ Many thanks to all who have helped out and contributed along the way, including
| ---------------------------------------------------------- | --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
| [Philipp Ehmele](https://github.com/imipenem) | [Institute of Computational Biology, Helmholtz Zentrum München, Munich, Germany](https://www.helmholtz-muenchen.de/icb/index.html) |
| [Gisela Gabernet](https://github.com/ggabernet) | [Quantitative Biology Center (QBiC) Tübingen, University of Tübingen, Germany](https://uni-tuebingen.de/en/research/research-infrastructure/quantitative-biology-center-qbic/) <br> [Department of Pathology, Yale School of Medicine, New Haven, USA](https://medicine.yale.edu/pathology/) |
| [Erik Garrison](https://github.com/ekg) | [The University of Tennessee Health Science Center, Memphis, Tennessee, TN, USA](https://uthsc.edu/) |
| [Andrea Guarracino](https://github.com/AndreaGuarracino) | [Genomics Research Centre, Human Technopole, Milan, Italy](https://humantechnopole.it/en/) <br> [The University of Tennessee Health Science Center, Memphis, Tennessee, TN, USA](https://uthsc.edu/) |
| [Erik Garrison](https://github.com/ekg) | [University of Tennessee Health Science Center, Memphis, Tennessee, TN, USA](https://uthsc.edu/) |
| [Andrea Guarracino](https://github.com/AndreaGuarracino) | [University of Tennessee Health Science Center, Memphis, Tennessee, TN, USA](https://uthsc.edu/) |
| [Friederike Hanssen](https://github.com/FriederikeHanssen) | [Quantitative Biology Center (QBiC) Tübingen, University of Tübingen, Germany](https://uni-tuebingen.de/en/research/research-infrastructure/quantitative-biology-center-qbic/) <br> [Biomedical Data Science, Department of Computer Science, University of Tübingen, Germany](https://uni-tuebingen.de/en/faculties/faculty-of-science/departments/computer-science/department/) |
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| [Peter Heringer](https://github.com/heringerp) | [Quantitative Biology Center (QBiC) Tübingen, University of Tübingen, Germany](https://uni-tuebingen.de/en/research/research-infrastructure/quantitative-biology-center-qbic/) <br> [Biomedical Data Science, Department of Computer Science, University of Tübingen, Germany](https://uni-tuebingen.de/en/faculties/faculty-of-science/departments/computer-science/department/) |
| [Michael Heuer](https://github.com/heuermh) | [Mammoth Biosciences, Inc., San Francisco, CA, USA](https://mammoth.bio) |
| [Lukas Heumos](https://github.com/zethson) | [Institute of Computational Biology, Helmholtz Zentrum München, Munich, Germany](https://www.helmholtz-muenchen.de/icb/index.html) <br> [Institute of Lung Biology and Disease and Comprehensive Pneumology Center, Helmholtz Zentrum München, Munich, Germany](https://www.helmholtz-muenchen.de/ilbd/the-institute/cpc/index.html) |
| [Simon Heumos](https://github.com/subwaystation) | [Quantitative Biology Center (QBiC) Tübingen, University of Tübingen, Germany](https://uni-tuebingen.de/en/research/research-infrastructure/quantitative-biology-center-qbic/) <br> [Biomedical Data Science, Department of Computer Science, University of Tübingen, Germany](https://uni-tuebingen.de/en/faculties/faculty-of-science/departments/computer-science/department/) |
| [Susanne Jodoin](https://github.com/SusiJo) | [Quantitative Biology Center (QBiC) Tübingen, University of Tübingen, Germany](https://uni-tuebingen.de/en/research/research-infrastructure/quantitative-biology-center-qbic/) |
| [Júlia Mir Petrol](https://github.com/mirpedrol) | [Quantitative Biology Center (QBiC) Tübingen, University of Tübingen, Germany](https://uni-tuebingen.de/en/research/research-infrastructure/quantitative-biology-center-qbic/) |
| [Júlia Mir Pedrol](https://github.com/mirpedrol) | [Quantitative Biology Center (QBiC) Tübingen, University of Tübingen, Germany](https://uni-tuebingen.de/en/research/research-infrastructure/quantitative-biology-center-qbic/) |

> \* Listed in alphabetical order

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88 changes: 79 additions & 9 deletions nextflow.config
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Expand Up @@ -273,23 +273,93 @@ dag {

manifest {
name = 'nf-core/pangenome'
author = """Simon Heumos, Michael L Heuer""" // The author field is deprecated from Nextflow version 24.10.0, use contributors instead
contributors = [
// TODO nf-core: Update the field with the details of the contributors to your pipeline. New with Nextflow version 24.10.0
[
name: 'Philipp Ehmele',
affiliation: """Institute of Computational Biology, Helmholtz Zentrum München, Munich, Germany""",
email: '',
github: '@imipenem',
contribution: ['contributor'],
orcid: ''
],
[
name: 'Gisela Gabernet',
affiliation: """Quantitative Biology Center (QBiC) Tübingen, University of Tübingen, Germany""",
email: '',
github: '@ggabernet',
contribution: ['contributor'],
orcid: ''
],
[
name: 'Erik Garrison',
affiliation: """University of Tennessee Health Science Center, Memphis, Tennessee, TN, USA""",
email: '',
github: '@ekg',
contribution: ['contributor'],
orcid: ''
],
[
name: 'Andrea Guarracino',
affiliation: """University of Tennessee Health Science Center, Memphis, Tennessee, TN, USA""",
email: '',
github: '@AndreaGuarracino',
contribution: ['contributor'],
orcid: ''
],
[
name: 'Friederike Hanssen',
affiliation: """Quantitative Biology Center (QBiC) Tübingen, University of Tübingen, Germany""",
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email: '',
github: '@FriederikeHanssen',
contribution: ['contributor'],
orcid: ''
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],
[
name: 'Peter Heringer',
affiliation: """Quantitative Biology Center (QBiC) Tübingen, University of Tübingen, Germany""",
email: '',
github: '@heringerp',
contribution: ['contributor'],
orcid: ''
],
[
name: 'Michael L Heuer',
affiliation: """Mammoth Biosciences, Inc., San Francisco, CA, USA""",
email: '',
github: '@heuermh',
contribution: ['author', 'maintainer'],
orcid: 'https://orcid.org/0000-0002-9052-6000'
],
[
name: 'Lukas Heumos',
affiliation: """Institute of Computational Biology, Helmholtz Zentrum München, Munich, Germany""",
email: '',
github: '@zethson',
contribution: ['contributor'],
orcid: ''
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https://orcid.org/0000-0002-8937-3457

],
[
name: 'Simon Heumos',
affiliation: '',
affiliation: """Quantitative Biology Center (QBiC) Tübingen, University of Tübingen, Germany""",
email: '',
github: '@subwaystation',
contribution: ['author', 'maintainer'],
orcid: 'https://orcid.org/0000-0003-3326-817X'
],
[
name: 'Susanne Jodoin',
affiliation: """Quantitative Biology Center (QBiC) Tübingen, University of Tübingen, Germany""",
email: '',
github: '',
contribution: [], // List of contribution types ('author', 'maintainer' or 'contributor')
github: '@SusiJo',
contribution: ['contributor'],
orcid: ''
],
[
name: ' Michael L Heuer',
affiliation: '',
name: 'Júlia Mir Pedrol',
affiliation: """Quantitative Biology Center (QBiC) Tübingen, University of Tübingen, Germany""",
email: '',
github: '',
contribution: [], // List of contribution types ('author', 'maintainer' or 'contributor')
github: '@mirpedrol',
contribution: ['contributor'],
orcid: ''
],
]
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