Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

Sign up for GitHub

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

Update README.md #38

Merged
merged 3 commits into from
Jan 9, 2025
Merged

Update README.md #38

Changes from 2 commits
Commits
Show all changes
3 commits
Select commit Hold shift + click to select a range
bd09b52
Update README.md
fferrari Jan 7, 2025
83a2311
[automated] Fix code linting
nf-core-bot Jan 8, 2025
b518fd6
restored a commented line
daisymut Jan 9, 2025
File filter

Filter by extension

Filter by extension
Conversations
Failed to load comments.
Loading
Jump to
Jump to file
Failed to load files.
Loading
Diff view
Diff view
7 changes: 3 additions & 4 deletions README.md
View file
Open in desktop
Original file line number Diff line number Diff line change
Expand Up @@ -99,11 +99,10 @@ For more details about the output files and reports, please refer to the

## Credits

nf-core/sammyseq was written by Lucio Di Filippo and Margherita Mutarelli and was based on the original pipeline developed _in-house_ by SAMMY-seq creators. <!-- TODO retreive all names and github usernames -->
The SAMMY-seq data analysis procedure was originally developed by the laboratory of Francesco Ferrari (IFOM-ETS, Milan; IGM-CNR, Pavia) in collaboration with the laboratory of Chiara Lanzuolo (INGM, Milan; ITB-CNR, Milan).
The orginal pipeline backbone was mainly he result of work by Cristiano Petrini (IFOM) and Endre Sebestyén (IFOM), with significant contributions by Ilario Tagliaferri (IFOM), Giovanni Lembo (IFOM) and Emanuele Di Patrizio Soldateschi (INGM). The project also benefited from the collaboration and input by Eva Pinatel (ITB-CNR). The product of this effort resulted in a first pipeline implemented in bash and adapted to work on Sun Grid Engine (SGE) scheduler.

<!-- We thank the following people for their extensive assistance in the development of this pipeline: -->
daisymut marked this conversation as resolved.
Show resolved Hide resolved

<!-- TODO nf-core: If applicable, make list of people who have also contributed -->
The data analysis pipeline was then implemented into the Nextflow framework (nf-core/sammyseq ) by Lucio Di Filippo (ISASI-CNR, Pozzuoli) and Margherita Mutarelli (ISASI-CNR).

## Acknowledgements

Expand Down
Loading