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nf-core/tools version 1.1
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@ewels ewels released this 14 Aug 19:03
1.1
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Very large release containing lots of work from the first nf-core hackathon, held in SciLifeLab Stockholm.

  • The Cookiecutter template has been merged into tools
    • The old repo above has been archived
    • New pipelines are now created using the command nf-core create
    • The nf-core template and associated linting are now controlled under the same version system
  • Large number of template updates and associated linting changes
    • New simplified cookicutter variable usage
    • Refactored documentation - simplified and reduced duplication
    • Better manifest variables instead of params for pipeline name and version
    • New integrated nextflow version checking
    • Updated travis docker pull command to use tagging to allow release tests to pass
    • Reverted Docker and Singularity syntax to use ENV hack again
  • Improved Python readme parsing for PyPI
  • Updated Travis tests to check that the correct dev branch is being targeted
  • New sync tool to automate pipeline updates
    • Once initial merges are complete, a nf-core bot account will create PRs for future template updates
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