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adding page navigation for tools training
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FranBonath committed Mar 20, 2024
1 parent b1ba26b commit 3838928
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Expand Up @@ -301,3 +301,12 @@ In the directory `exercise_6` you will find the custom script `print_hello.py`,
</details>
:::
<p class="text-center">
<a href="../add_nf_core_module/" class="btn btn-lg btn-success" style="font-size: 14px">
< go to Chapter 4
</a>
<a href="../nf_schema/" class="btn btn-lg btn-success" style="font-size: 14px">
go to Chapter 6 >
</a>
</p>
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Expand Up @@ -452,3 +452,12 @@ comparison to simple nextflow pipeline from the basic Nextflow training would be
</details>
:::
<p class="text-center">
<a href="../template_walk_through/" class="btn btn-lg btn-success" style="font-size: 14px">
< go to Chapter 3
</a>
<a href="../add_custom_module/" class="btn btn-lg btn-success" style="font-size: 14px">
go to Chapter 5 >
</a>
</p>
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Expand Up @@ -68,3 +68,11 @@ If you have lost your environment, you can find the main scripts used in this tu
To save any file locally from the explorer panel, right-click the file and select Download.

</details>
<p class="text-center">
<a href="../" class="btn btn-lg btn-success" style="font-size: 14px">
< go to training index
</a>
<a href="../nf_core_create_tool/" class="btn btn-lg btn-success" style="font-size: 14px">
go to Chapter 2 >
</a>
</p>
10 changes: 5 additions & 5 deletions src/content/docs/contributing/nf_core_basic_training/index.md
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Expand Up @@ -59,30 +59,30 @@ c) Running the pipeline using the test profile
d) Linting the pipeline

<p class="text-left">
<a href="nf_core_create_tool/" class="btn btn-lg btn-success" target="_blank">
<a href="nf_core_create_tool/" class="btn btn-lg btn-success">
Chapter 3 - Exploring the nf-core template files
</a>
</p>

The template contains a range of important files and directories. This chapter is giving explanations to all the template content important to beginners.

<p class="text-left">
<a href="add_nf_core_module/" class="btn btn-lg btn-success" target="_blank">
<a href="add_nf_core_module/" class="btn btn-lg btn-success">
Chapter 4 - Adding a nf-core module to your pipeline
</a>
</p>
<p class="text-left">
<a href="add_custom_module/" class="btn btn-lg btn-success" target="_blank">
<a href="add_custom_module/" class="btn btn-lg btn-success">
Chapter 5 - Adding a local custom module to your pipeline
</a>
</p>
<p class="text-left">
<a href="nf_schema/" class="btn btn-lg btn-success" target="_blank">
<a href="nf_schema/" class="btn btn-lg btn-success">
Chapter 6 - Working with Nextflow schema
</a>
</p>
<p class="text-left">
<a href="linting_modules/" class="btn btn-lg btn-success" target="_blank">
<a href="linting_modules/" class="btn btn-lg btn-success">
Chapter 7 - Linting your modules
</a>
</p>
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Expand Up @@ -12,3 +12,12 @@ As well as the pipeline template you can lint individual or all modules with a s
nf-core modules lint --all
```

<p class="text-center">
<a href="../" class="btn btn-lg btn-success" style="font-size: 14px">
< go to Chapter 6
</a>
<a href="../index/" class="btn btn-lg btn-success" style="font-size: 14px">
go to training index >
</a>
</p>
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Expand Up @@ -357,3 +357,12 @@ nf-core lint
</details>

:::

<p class="text-center">
<a href="../gitpod_environment/" class="btn btn-lg btn-success" style="font-size: 14px">
< go to Chapter 1
</a>
<a href="../template_walk_through/" class="btn btn-lg btn-success" style="font-size: 14px">
go to Chapter 3 >
</a>
</p>
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Expand Up @@ -62,3 +62,12 @@ Here in the schema editor you can edit:
</details>

:::

<p class="text-center">
<a href="../add_custom_module/" class="btn btn-lg btn-success" style="font-size: 14px">
< go to Chapter 5
</a>
<a href="../linting_modules/" class="btn btn-lg btn-success" style="font-size: 14px">
go to Chapter 7 >
</a>
</p>
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Expand Up @@ -196,3 +196,12 @@ This file keeps track of modules installed using nf-core tools from the nf-core/

[MORE QUESTIONS CAN BE ADDED HERE]
:::

<p class="text-center">
<a href="../nf_core_create_tool/" class="btn btn-lg btn-success" style="font-size: 14px">
< go to Chapter 2
</a>
<a href="../add_nf_core_module/" class="btn btn-lg btn-success" style="font-size: 14px">
go to Chapter 4 >
</a>
</p>

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