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mashehu committed Dec 9, 2024
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- Pipelines generated with nf-core/tools now come with their own Research Object (RO) Crate.
RO Crate is an open-source standard which we use to describe our pipelines and their components in a structured way and helps with automated provenance tracking.
More information can be found [here](https://www.researchobject.org/ro-crate/).
More information about RO Crates can be found [here](https://www.researchobject.org/ro-crate/).
Thanks to [Phil Ewels](https://github.com/ewels), [Stian Soiland-Reyes](https://github.com/stain) and [Simone Leo ](https://github.com/simleo) for kicking off this effort and providing useful feedback!

:::note
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If you want to update the RO Crate for your pipeline, run `nf-core pipelines rocrate` (automatically run with `nf-core pipelines sync`).

For more information about the command and how it generates the RO Crate, see [the docs](https://nf-co.re/docs/nf-core-tools/pipelines/rocrate).

- `nf-core pipelines download` supports now ORAS container URIs.
Previously, you needed to use a `https://` prefix, but thanks to the work by [@MatthiasZepper](https://github.com/MatthiasZepper") we can now use the `oras://` prefix.
- `main` as default release branch for pipelines. With this release we extended the template and tooling to support either `main` or `master` as the default branch for pipelines.
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