update envmodules

noaa-ocs-modeling · May 13, 2021 · 8e96477 · 8e96477
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diff --git a/modulefiles/PlatformFuncs b/modulefiles/PlatformFuncs
@@ -0,0 +1,101 @@
+###########################################################################
+### NEMS Build System
+### PlatformFuncs :: Utility functions
+###
+### Author: Panagiotis Velissariou <panagiotis.velissariou@noaa.gov>
+###########################################################################
+
+get_env_hdf5()
+{
+#  if [ "${_found_hdf5:-FALSE}" = "FALSE" ]; then
+    _found_hdf5=FALSE
+    if [ -n "${HDF5:+1}" ]; then
+      HDF5="${HDF5}"
+      export HDF5HOME="${HDF5}"
+      HDF5_DIR="${HDF5}"
+      HDF5_PATH="${HDF5}"
+      HDF5_ROOT="${HDF5}"
+      _found_hdf5=TRUE
+    else
+      for _var in DIR HOME PATH ROOT
+      do
+        _var_val="$(eval "echo \"\$HDF5${_var}\"")"
+        if [ -n "${_var_val:+1}" ]; then
+          HDF5="${_var_val}"
+          export HDF5HOME="${_var_val}"
+          HDF5_DIR="${_var_val}"
+          HDF5_PATH="${_var_val}"
+          HDF5_ROOT="${_var_val}"
+          _found_hdf5=TRUE
+          break
+        else
+          _var_val="$(eval "echo \"\$HDF5_${_var}\"")"
+          if [ -n "${_var_val:+1}" ]; then
+            HDF5="${_var_val}"
+            export HDF5HOME="${_var_val}"
+            HDF5_DIR="${_var_val}"
+            HDF5_PATH="${_var_val}"
+            HDF5_ROOT="${_var_val}"
+            _found_hdf5=TRUE
+            break
+          fi
+        fi
+      done
+    fi
+    unset _name _var _var_val
+#  fi
+
+  return 0
+}
+
+
+get_env_netcdf()
+{
+#  if [ "${_found_netcdf:-FALSE}" = "FALSE" ]; then
+    export _found_netcdf=FALSE
+    for _name in NETCDF NETCDF4 NetCDF NetCDF4
+    do
+      if [ "${_found_netcdf}" = "TRUE" ]; then
+        break
+      fi
+
+      _var_val="$(eval "echo \"\$${_name}\"")"
+      if [ -n "${_var_val:+1}" ]; then
+        export NETCDF="${_var_val}"
+        export NETCDFHOME="${_var_val}"
+        export NETCDF_DIR="${_var_val}"
+        export NETCDF_PATH="${_var_val}"
+        export NETCDF_ROOT="${_var_val}"
+        export _found_netcdf=TRUE
+      else
+        for _var in DIR HOME PATH ROOT
+        do
+          _var_val="$(eval "echo \"\$${_name}${_var}\"")"
+          if [ -n "${_var_val:+1}" ]; then
+            export NETCDF="${_var_val}"
+            export NETCDFHOME="${_var_val}"
+            export NETCDF_DIR="${_var_val}"
+            export NETCDF_PATH="${_var_val}"
+            export NETCDF_ROOT="${_var_val}"
+            export _found_netcdf=TRUE
+            break
+          else
+            _var_val="$(eval "echo \"\$${_name}_${_var}\"")"
+            if [ -n "${_var_val:+1}" ]; then
+              export NETCDF="${_var_val}"
+              export NETCDFHOME="${_var_val}"
+              export NETCDF_DIR="${_var_val}"
+              export NETCDF_PATH="${_var_val}"
+              export NETCDF_ROOT="${_var_val}"
+              export _found_netcdf=TRUE
+              break
+            fi
+          fi
+        done
+      fi
+    done
+    unset _name _var _var_val
+#  fi
+
+  return 0
+}
diff --git a/modulefiles/envmodules_gnu.linux b/modulefiles/envmodules_gnu.linux
@@ -5,20 +5,24 @@
 
 ####################
 ### (1) Load all needed environment modules.
-#module purge
-#module load gcc impi
+module purge
+module load intel impi
 #module load szip hdf5
-#module load netcdf
+module load netcdf
 
-#module load esmf
+module load esmf
 
 
 ####################
 ### (2) Set some environments varaiables related to the loaded
 ###     modules and required to compile the NEMS application properly.
+funcs="$( find . -type f -name "PlatformFuncs" | head -n 1 )"
+[ -f "${funcs}" ] && source "${funcs}"
+unset funcs
 
-export HDF5HOME=${HDF5}
-export NETCDFHOME=${NETCDF}
+
+get_env_hdf5
+get_env_netcdf
 
 export NETCDF_CONFIG=${NETCDFHOME:+${NETCDFHOME}/bin/nc-config}
 export NETCDF_INCDIR=${NETCDFHOME:+${NETCDFHOME}/include}

diff --git a/modulefiles/envmodules → modulefiles/envmodules_gnu.local b/modulefiles/envmodules → modulefiles/envmodules_gnu.local
@@ -5,12 +5,13 @@
 
 ####################
 ### (1) Load all needed environment modules.
-#module purge
-#module load intel impi
-#module load szip hdf5
-#module load netcdf
+module purge
+module load gcc impi
+module load szip hdf5
+module load netcdf
 
-#module load esmf
+module use /contrib/modulefiles
+module load esmf
 
 
 ####################

diff --git a/modulefiles/envmodules_intel.linux b/modulefiles/envmodules_intel.linux
@@ -5,21 +5,26 @@
 
 ####################
 ### (1) Load all needed environment modules.
-#module purge
-#module load intel impi
+module purge
+module load intel impi
 #module load szip hdf5
-#module load netcdf
+module load netcdf
 
-#module load esmf
+module load esmf
 
 
 ####################
 ### (2) Set some environments varaiables related to the loaded
 ###     modules and required to compile the NEMS application properly.
+funcs="$( find . -type f -name "PlatformFuncs" | head -n 1 )"
+[ -f "${funcs}" ] && source "${funcs}"
+unset funcs
 
-export HDF5HOME=${HDF5}
-export NETCDFHOME=${NETCDF}
 
+get_env_hdf5
+get_env_netcdf
+
+export NETCDF_CONFIG=${NETCDFHOME:+${NETCDFHOME}/bin/nc-config}
 export NETCDF_INCDIR=${NETCDFHOME:+${NETCDFHOME}/include}
 export NETCDF_LIBDIR=${NETCDFHOME:+${NETCDFHOME}/lib}
 

diff --git a/modulefiles/envmodules_intel.local b/modulefiles/envmodules_intel.local
@@ -0,0 +1,29 @@
+#!/bin/bash-*-Shell-script-modules*-
+
+# This script is responsible for loading modules that are
+# compatible with the NUOPC Layer version used in NEMS.
+
+####################
+### (1) Load all needed environment modules.
+module purge
+module load intel/18.0.5.274 impi/2018.0.4
+module load szip
+
+module use /home/emc.nemspara/SOFT-hera/modulefiles
+module load hdf5_parallel/1.10.6.release
+module load netcdf_parallel/4.7.4.release
+module load esmf/8.1.0bs36g
+
+
+####################
+### (2) Set some environments varaiables related to the loaded
+###     modules and required to compile the NEMS application properly.
+
+export HDF5HOME=${HDF5}
+export NETCDFHOME=${NETCDF}
+
+export NETCDF_CONFIG=${NETCDFHOME:+${NETCDFHOME}/bin/nc-config}
+export NETCDF_INCDIR=${NETCDFHOME:+${NETCDFHOME}/include}
+export NETCDF_LIBDIR=${NETCDFHOME:+${NETCDFHOME}/lib}
+
+export ESMFMKFILE=${ESMFMKFILE}
diff --git a/modulefiles/envmodules_pgi.linux b/modulefiles/envmodules_pgi.linux
@@ -5,23 +5,28 @@
 
 ####################
 ### (1) Load all needed environment modules.
-#module purge
-#module load pgi impi
+module purge
+module load intel impi
 #module load szip hdf5
-#module load netcdf
+module load netcdf
 
-#module load esmf
+module load esmf
 
 
 ####################
 ### (2) Set some environments varaiables related to the loaded
 ###     modules and required to compile the NEMS application properly.
+funcs="$( find . -type f -name "PlatformFuncs" | head -n 1 )"
+[ -f "${funcs}" ] && source "${funcs}"
+unset funcs
 
-export HDF5HOME=${HDF5}
-export NETCDFHOME=${NETCDF}
+
+get_env_hdf5
+get_env_netcdf
 
 export NETCDF_CONFIG=${NETCDFHOME:+${NETCDFHOME}/bin/nc-config}
 export NETCDF_INCDIR=${NETCDFHOME:+${NETCDFHOME}/include}
 export NETCDF_LIBDIR=${NETCDFHOME:+${NETCDFHOME}/lib}
 
 export ESMFMKFILE=${ESMFMKFILE}
+
diff --git a/modulefiles/envmodules_pgi.local b/modulefiles/envmodules_pgi.local
@@ -0,0 +1,34 @@
+#!/bin/bash-*-Shell-script-modules*-
+#----------
+[[ "$0" == "bash" || "$0" == "-bash" ]] && retv=return || retv=exit
+echo "$(basename ${BASH_SOURCE[0]}) :: This environment is either not configured or not supported"
+echo "  Exiting ..."
+${retv} 1
+#----------
+
+# This script is responsible for loading modules that are
+# compatible with the NUOPC Layer version used in NEMS.
+
+####################
+### (1) Load all needed environment modules.
+module purge
+module load pgi impi
+module load szip hdf5
+module load netcdf
+
+module use /contrib/modulefiles
+module load esmf
+
+
+####################
+### (2) Set some environments varaiables related to the loaded
+###     modules and required to compile the NEMS application properly.
+
+export HDF5HOME=${HDF5}
+export NETCDFHOME=${NETCDF}
+
+export NETCDF_CONFIG=${NETCDFHOME:+${NETCDFHOME}/bin/nc-config}
+export NETCDF_INCDIR=${NETCDFHOME:+${NETCDFHOME}/include}
+export NETCDF_LIBDIR=${NETCDFHOME:+${NETCDFHOME}/lib}
+
+export ESMFMKFILE=${ESMFMKFILE}