add tests CI

.env.sample

@@ -23,6 +23,7 @@ NCBO_ANNOTATORPLUS_ENABLED=false
 SUPPORT_EMAIL=sifrportal-support@lirmm.fr
 RELEASE_VERSION="OntoPortal Appliance 3.0.1"
 USE_RECAPTCHA=false
+ANNOTATOR_URL=""
 
 ##################### KAMAL configuration ####################
 IMAGE_NAME=

.github/workflows/tests.yml

@@ -0,0 +1,17 @@
+name: "Run docker scripts tests CI"
+
+on:
+  push:
+  pull_request:
+    types: [opened, reopened]
+jobs:
+  test:
+    runs-on: ubuntu-latest
+    steps:
+      - name: Checkout code
+        uses: actions/checkout@v3
+        with:
+          submodules: "recursive" # Make sure submodules are fetched recursively
+
+      - name: Run OntoPortal Docker tests
+        run: test/run_test.sh

test/run_tests.sh

@@ -1,3 +1,2 @@
 #!/usr/bin/env bash
-./test/bats/bin/bats ./test/tests.sh
-
+TERM=xterm test/bats/bin/bats -T --verbose-run test/tests.sh

test/tests.sh

@@ -5,10 +5,11 @@ setup() {
     load 'test_helper/bats-assert/load'
     DIR="$( cd "$( dirname "$BATS_TEST_FILENAME" )" >/dev/null 2>&1 && pwd )"
     PATH="$DIR/../src:$PATH"
-    ./ontoportal clean -f
 }
 
 @test "Running and Stopping API" {
+   ./ontoportal clean -f
+
   run ./ontoportal start api 
   assert_output --partial "[+] API is up and running!"
   refute_output --partial 'error'
@@ -20,6 +21,7 @@ setup() {
 }
 
 @test "Running and Stopping UI" {
+   ./ontoportal clean -f
 
   ./ontoportal start api 
 
@@ -29,7 +31,8 @@ setup() {
   refute_output --partial 'error'
   refute_output --partial 'ERROR'
 
-   ./ontoportal stop ui
+  ./ontoportal stop api 
+  ./ontoportal stop ui
 
   run docker compose -f docker-compose_ui.yml ps
   assert_output "NAME      IMAGE     COMMAND   SERVICE   CREATED   STATUS    PORTS"