installation

• Windows

  • Install binaries (Openalea, Vplants, Alinea) from OpenAlea
  • Install dependencies with pip : matplotlib, six, ipython[notebook]
  • Install binary dependencies with pip using windows wheel found here (http://www.lfd.uci.edu/~gohlke/pythonlibs/): numpy + mkl (<=1.11), pandas, rpy2 (together with R 32bit installed)
  • check the following environment variables are correctly set: - R_HOME pointing to R root directory (No space, use ~1 syntax) - R_USER pointing to any directory (eg (C:)
  • update Adel versiion: - uninstall Adel - re-install adel form github - openalea-incubator / adel
  • update openalea/mtg version from github/openalea/mtg
  • install alep form openalea incubator

• Mac

• Linux