Roche/Genentech - Insights Engineering

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98 repositories

julia-images
Public
Insights Engineering Julia Images
docker julia images reproducibility
Shell
•0•0•0•0•Updated Jan 25, 2025Jan 25, 2025
tlg-catalog
Public
A catalog of Tables, Listings and Graphs (TLGs) created with NEST R packages
Lua
•
Other
•10•24•16•0•Updated Jan 25, 2025Jan 25, 2025
biomarker-catalog
Public
Biomarker Analysis Templates of Tables And Graphs 📊
SCSS
•1•8•3•0•Updated Jan 25, 2025Jan 25, 2025
teal.gallery
Public
A Gallery of Exploratory Web Apps used for Analyzing Clinical Trial Data
r shiny webapp nest clinical-trials
R
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Other
•9•32•18•3•Updated Jan 25, 2025Jan 25, 2025
tern
Public
Table, Listings, and Graphs (TLG) library for common outputs used in clinical trials
graphs nest clinical-trials tables listings outputs r
R
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Other
•22•78•79•2•Updated Jan 24, 2025Jan 24, 2025
teal.code
Public
Code storage and execution class for teal applications
nest r shiny
R
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Other
•8•11•10•1•Updated Jan 24, 2025Jan 24, 2025
teal.reporter
Public
Create and preview reports with Shiny modules
reporting nest r shiny
R
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Other
•9•8•17•2•Updated Jan 24, 2025Jan 24, 2025
teal.modules.clinical
Public
Provides teal modules for the standard clinical trials outputs
modules shiny nest clinical-trials outputs r
R
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Other
•18•34•86•4•Updated Jan 24, 2025Jan 24, 2025
ard-catalog
Public
Catalog of QC comparison of rtables using {cards} and {cardx}
r
JavaScript
•0•1•1•0•Updated Jan 24, 2025Jan 24, 2025
teal.modules.general
Public
General Purpose Teal Modules
r modules shiny nest general-purpose
R
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Other
•15•12•71•8•Updated Jan 24, 2025Jan 24, 2025
teal
Public
Exploratory Web Apps for Analyzing Clinical Trial Data
webapp nest clinical-trials r shiny
R
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Other
•42•195•79•5•Updated Jan 24, 2025Jan 24, 2025
hermes
Public
Preprocessing, analyzing, and reporting of RNA-seq data
rna-seq statistical-engineering r rstats r-package
R
•2•11•2•0•Updated Jan 24, 2025Jan 24, 2025
teal.transform
Public
Reproducible transform and merge module for teal applications
modules merge transform nest r
R
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Other
•3•3•35•1•Updated Jan 24, 2025Jan 24, 2025
teal.data
Public
Data model for teal applications
data-model nest r
R
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Other
•9•11•13•1•Updated Jan 24, 2025Jan 24, 2025
teal.modules.hermes
Public
RNA-seq analysis modules to add to a teal application
modules rna-seq-analysis r shiny
R
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Other
•1•7•6•3•Updated Jan 24, 2025Jan 24, 2025
teal.osprey
Public
Community efforts to collect teal modules for TLGs defined in the osprey package
modules nest r
R
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Other
•2•5•16•1•Updated Jan 24, 2025Jan 24, 2025
teal.goshawk
Public
Modules that produce web interfaces through which longitudinal visualizations can be dynamically
r modules nest
R
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Other
•2•3•24•0•Updated Jan 24, 2025Jan 24, 2025
teal.slice
Public
Reproducible slice module for teal applications
modules slice nest r
R
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Other
•6•11•43•0•Updated Jan 23, 2025Jan 23, 2025
chevron
Public
Standard TLGs For Clinical Trials Reporting
r graphs reporting nest clinical-trials tables listings
R
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Other
•1•12•39•3•Updated Jan 23, 2025Jan 23, 2025
random.cdisc.data
Public
Create random CDISC data
r cdisc dataset
R
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Other
•8•33•17•3•Updated Jan 23, 2025Jan 23, 2025
tern.rbmi
Public
Create TLGs using rbmi and tern
graphs tables listings r
R
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Other
•1•3•0•0•Updated Jan 23, 2025Jan 23, 2025
tern.gee
Public
Create TLGs using Generalized Estimating Equations (GEE)
R
•2•8•1•0•Updated Jan 23, 2025Jan 23, 2025
tern.mmrm
Public
Create MMRM TLGs using lme4 and tern
graphs tables listings statistical-engineering r
R
•3•6•10•1•Updated Jan 23, 2025Jan 23, 2025
cards
Public
CDISC Analysis Results Data
r analysis dataset cdisc
R
•2•36•22•4•Updated Jan 23, 2025Jan 23, 2025
teal.logger
Public
Logging setup for the teal family of packages
utilities logging nest r
R
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Other
•2•4•3•0•Updated Jan 22, 2025Jan 22, 2025
goshawk
Public
Functions that plot and summarize biomarkers/labs of interest
plot summarization r
R
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Other
•1•5•10•0•Updated Jan 22, 2025Jan 22, 2025
r.pkg.template
Public template
An opinionated R package template with CI/CD built-in
template r github-actions git
Shell
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Other
•18•39•4•2•Updated Jan 22, 2025Jan 22, 2025
nestcolor
Public
Package managing visual conventions of NEST graphs
R
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Other
•2•5•0•0•Updated Jan 21, 2025Jan 21, 2025
rbmi
Public
Reference based multiple imputation R package
R
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Other
•9•18•23•5•Updated Jan 21, 2025Jan 21, 2025
rtables
Public
Reporting tables with R
tables pharmaceuticals r
R
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Other
•50•230•82•0•Updated Jan 21, 2025Jan 21, 2025