Repositories list

• kids-chd

  Public
  Congenital Heart Disease among Children

  R

  •

  GNU General Public License v3.0

  •0•0•3•0•Updated Jan 9, 2025Jan 9, 2025

• MADMMplasso

  Public
  Multi variate multi response 'ADMM' with interaction effects

  R

  •

  GNU General Public License v3.0

  •0•1•2•0•Updated Jan 9, 2025Jan 9, 2025

• BayesMallows

  Public
  R-package for Bayesian preference learning with the Mallows rank model.

  r-packagemallows-model

  R

  •

  GNU General Public License v3.0

  •10•21•8•0•Updated Jan 6, 2025Jan 6, 2025

• course_med3007

  Public
  Course website for MED3007: Statistical Principles in Genomics

  R

  •

  MIT License

  •0•1•0•0•Updated Dec 20, 2024Dec 20, 2024

• public-slides

  Public
  A repository for slides presented to the public or publicly-available slides

  gitslidespresentations

  HTML

  •

  Creative Commons Attribution Share Alike 4.0 International

  •0•1•0•0•Updated Dec 13, 2024Dec 13, 2024

• rBAPS

  Public
  R implementation of the BAPS software for Bayesian Analysis of Population Structure

  r-packagepopulation-structurebayesian-analysis

  R

  •

  GNU General Public License v3.0

  •4•10•10•0•Updated Dec 12, 2024Dec 12, 2024

• workshop-stat-highdim

  Public
  Workshop website for Statistical Principles in Machine Learning for Small Biomedical Data

  R

  •

  MIT License

  •2•1•0•0•Updated Dec 9, 2024Dec 9, 2024

• norkost_doc

  Public
  Documentation for Norkost x SPADE

  R

  •

  MIT License

  •0•0•0•0•Updated Dec 5, 2024Dec 5, 2024

• noreden_doc

  Public
  Documentation for NorEden project

  R

  •0•0•0•0•Updated Dec 5, 2024Dec 5, 2024

• BayesSurvive

  Public
  Bayesian survival models for high-dimensional data

  survival-analysisomics-data-integrationgraph-learning+ 3bayesian-variable-selectionhigh-dimensional-statisticsbayesian-cox-models

  R

  •

  GNU General Public License v3.0

  •1•1•3•0•Updated Oct 23, 2024Oct 23, 2024

• napic

  Public
  R code for the NAPiC trial analyses

  R

  •

  MIT License

  •0•0•0•0•Updated Oct 17, 2024Oct 17, 2024

• burst

  Public
  Code for the BURST trial

  HTML

  •

  MIT License

  •0•0•0•0•Updated Oct 17, 2024Oct 17, 2024

• pyPhenoPop

  Public
  Phenotypic deconvolution in heterogeneous cancer cell populations using drug screen data

  Python

  •

  MIT License

  •1•2•0•0•Updated Oct 17, 2024Oct 17, 2024

• nor-solidarity

  Public
  GitHub respository for the NOR-SOLIDARITY trial

  clinical-trialsctucovid-19

  HTML

  •

  Creative Commons Attribution Share Alike 4.0 International

  •0•0•0•0•Updated Oct 11, 2024Oct 11, 2024

• pCRscore

  Public
  Python package to calculate pCR scores

  Python

  •

  GNU General Public License v3.0

  •0•0•1•0•Updated Oct 2, 2024Oct 2, 2024

• Melanoma-Incidence-in-Norway

  Public
  R scripts used in the analysis of Melanoma incidence in Norway, 1983–2019

  R

  •0•0•0•0•Updated Oct 1, 2024Oct 1, 2024

• bd4predict

  Public
  BD4QoLPredict is an API and Dashboard developed in the context of the BD4QoL European project for improving quality of life of head and neck cancer survivors.

  machine-learningprediction-model

  Python

  •0•0•0•0•Updated Sep 30, 2024Sep 30, 2024

• BAPS

  Public
  Bayesian Analysis of Population Structure

  MATLAB

  •0•0•4•0•Updated Sep 27, 2024Sep 27, 2024

• TruncExpFam

  Public
  R package to generate data related to the Truncated Exponential Family

  truncated-distributionr-package

  R

  •

  GNU General Public License v3.0

  •1•0•2•0•Updated Sep 26, 2024Sep 26, 2024

• permChacko

  Public
  Implementation of a modified Chacko (1966) algorithm for order restriction

  R

  •

  GNU General Public License v3.0

  •0•0•2•0•Updated Sep 18, 2024Sep 18, 2024

• org-metrics-dashboard

  Public
  An actions-powered dashboard to get an overview of your organization's open source repository health

  TypeScript

  •

  MIT License

  •24•0•0•0•Updated Sep 2, 2024Sep 2, 2024

• contingencytables

  Public
  Statistical Analysis of Contingency Tables

  contingency-tabler-package

  R

  •

  GNU General Public License v3.0

  •2•3•1•0•Updated Aug 29, 2024Aug 29, 2024

• survomics

  Public
  Tutorial on survival modeling with omics data

  tutorialsurvival-analysispenalized-cox-models+ 5multi-omicsmlr3mlr3probabayesian-cox-modelssurvival-model-evaluation

  TeX

  •

  MIT License

  •1•11•1•0•Updated Aug 22, 2024Aug 22, 2024

• ctu-template

  Public
  R

  •

  MIT License

  •0•0•0•0•Updated Aug 19, 2024Aug 19, 2024

• OCBEdev

  Public
  Development tools for R packages (complements `devtools`, `usethis`, etc.)

  R

  •

  GNU General Public License v3.0

  •0•0•0•0•Updated Aug 9, 2024Aug 9, 2024

• BD4QoL

  Public
  Big Data for Quality of Life (BD4QoL) EU project repository.

  machine-learningquality-of-lifecancer-research+ 1clinical-prediction-models

  Python

  •

  MIT License

  •0•0•0•0•Updated Jul 15, 2024Jul 15, 2024

• psbcSpeedUp

  Public
  Penalized Semiparametric Bayesian Cox Models

  survival-analysisomics-databayesian-cox-models

  C++

  •

  GNU General Public License v3.0

  •1•3•0•0•Updated Jul 3, 2024Jul 3, 2024

• EMJMCMC

  Public
  Bayesian model configuration, selection and averaging in complex regression contexts

  R

  •5•1•3•0•Updated May 6, 2024May 6, 2024

• teaching_mf9130e

  Public
  Course material for MF9130E

  R

  •

  MIT License

  •10•15•0•0•Updated Apr 24, 2024Apr 24, 2024

• trajpy

  Public
  Trajpy - empowering feature engineering for trajectory analysis across domains.

  time-seriestrajectory-analysisdiffusion+ 3python-packagerepeated-measurementscell-migration

  Python

  •

  GNU General Public License v3.0

  •2•7•11•0•Updated Mar 23, 2024Mar 23, 2024