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@rat-genome-database

Rat Genome Database

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  1. rgd-core-library rgd-core-library Public

    Domain layer and shared components

    Java

  2. rgd-web-application rgd-web-application Public

    Code used by the RGD web site and tools

    JavaScript 1

  3. rgd-web-services rgd-web-services Public

    Swagger implementation

    Java

  4. rgd-annotation-files rgd-annotation-files Public

    GO annotation files in GAF, GPAD and GPI format

Repositories

Showing 10 of 144 repositories
  • hgnc-pipeline Public

    Handles obsolete HGNC IDs for human genes.

    rat-genome-database/hgnc-pipeline’s past year of commit activity
    Java 0 GPL-3.0 0 0 0 Updated Jan 27, 2025
  • pubmed-crawler2 Public
    rat-genome-database/pubmed-crawler2’s past year of commit activity
    Java 0 GPL-3.0 0 0 0 Updated Jan 27, 2025
  • rgd-core-library Public

    Domain layer and shared components

    rat-genome-database/rgd-core-library’s past year of commit activity
    Java 0 GPL-3.0 0 0 0 Updated Jan 27, 2025
  • chromosome-pipeline Public

    Load chromosome and cytoband information.

    rat-genome-database/chromosome-pipeline’s past year of commit activity
    Java 0 GPL-3.0 0 0 0 Updated Jan 27, 2025
  • rgd-annotation-files Public

    GO annotation files in GAF, GPAD and GPI format

    rat-genome-database/rgd-annotation-files’s past year of commit activity
    0 GPL-3.0 0 1 0 Updated Jan 25, 2025
  • elastic-search-indexer-pipeline Public

    Pipeline to create elastic search indexes.

    rat-genome-database/elastic-search-indexer-pipeline’s past year of commit activity
    Java 0 GPL-3.0 0 0 0 Updated Jan 24, 2025
  • gff3-pipeline Public

    Creates gff3 files to be loaded into RGD JBrowse instance.

    rat-genome-database/gff3-pipeline’s past year of commit activity
    Java 0 GPL-3.0 0 0 0 Updated Jan 24, 2025
  • ftp-file-extracts-pipeline Public

    Generate weekly files for RGD FTP site

    rat-genome-database/ftp-file-extracts-pipeline’s past year of commit activity
    Java 1 GPL-3.0 1 0 0 Updated Jan 24, 2025
  • rgd-web-application Public

    Code used by the RGD web site and tools

    rat-genome-database/rgd-web-application’s past year of commit activity
    JavaScript 1 GPL-3.0 0 0 0 Updated Jan 24, 2025
  • spring-ai-chat-rag Public

    A Spring Boot application leveraging OpenAI embeddings and PostgreSQL vector store for efficient document retrieval and question answering through RAG (Retrieval Augmented Generation). Enables document uploads, semantic search, and context-aware responses.

    rat-genome-database/spring-ai-chat-rag’s past year of commit activity
    Java 0 0 0 0 Updated Jan 24, 2025
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