Fix making density images with ITK

Fix getting the labels image spacing when loading the image through ITK rather than SimpleITK.
sanderslab · Nov 18, 2023 · 38e112e · 38e112e
1 parent ece22f3
commit 38e112e
Showing 1 changed file with 1 addition and 1 deletion.
diff --git a/magmap/io/export_regions.py b/magmap/io/export_regions.py
@@ -271,7 +271,7 @@ def make_heat_map():
         labels_img = sitk_io.convert_img(labels_img_sitk)
 
         is_2d = labels_img.ndim == 2
-        labels_res = list(labels_img_sitk.GetSpacing()[::-1])
+        labels_res = list(labels_img_sitk.GetSpacing())[::-1]
         if is_2d:
             # temporarily convert 2D images to 3D
             labels_img = labels_img[None]