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Release notes for simplified mapping metric to labels image (#658)
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yoda-vid committed Jun 12, 2024
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- Density/heat maps can be specified through `--reg_suffixes density=<suffix>` (#129)
- Write point files for corresponding-point-based registration (#195)
- Quieter console output by default (#335)
- CLI arguments are logged by default (#658)
- Fixed to only remove the final extension from image paths, and paths given by the `--prefix <path>` CLI argument do not undergo any stripping (#115)

#### Atlas refinement
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- `ITK-Elastix` support has been added as an alternative to `SimpleITK` (#495, #500, #504)
- Both libraries are now optional rather than required dependencies (#497)
- Better support for image direction metadata (#497)
- Easier to map stats like cell metrics to labels (#658)
- Fixed changes to large label IDs during registration (#303)

#### Cell detection
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