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Support ITK-Elastix for groupwise registration #500

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merged 4 commits into from
May 24, 2023

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Addresses #438. Extends support for ITK-Elastix to perform groupwise registration as an alternative to SimpleITK with Elastix. Also removes the remaining references to SimpleITK that would cause an error if the package is not loaded. We have removed the function to register atlas to labels since it is likely unused, and its functionality can be accessed through the other registration functions that now support ITK-Elastix.

yoda-vid added 3 commits May 22, 2023 17:41
Check for the package before setting this threader.
- Fall back to groupwise registration using ITK-Elastix if SimpleITK is not available
- Support either library for reading or writing transformation files
Remove this function as it has not been used and can be replaced by other existing functions.
@yoda-vid yoda-vid added the enhancement New feature or request label May 23, 2023
@yoda-vid yoda-vid added this to the v1.6.0 milestone May 23, 2023
@yoda-vid yoda-vid merged commit bbd666a into support_itk_elastix May 24, 2023
@yoda-vid yoda-vid deleted the groupwise_itk_reg branch May 24, 2023 03:21
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