Save more DSC metrics when in the merge atlas segmentations task #57
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- Measure the DSC of the atlas foreground and combined new rather than original labels - Remove redundant measurement
- Fix some messages that referred to more specific situations that are not always applicable - Use logging
- Save to file rather than only printing to console - Use logging
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DSC metrics between the original and new labels are measured and printed to console during the
merge_atlas_segstasks but not saved to file. Now that metrics from this task are saved (#51, #54), this PR saves these labels-specific metrics as well. Additionally, the atlas to labels DSC metric already saved is fixed to use the new rather than the original labels.