Merge pull request #21 from sanger-pathogens/acknowledgements

Acknowledgements

F2/endF2.md

@@ -4,4 +4,20 @@
 
 Please complete this short [Google Form](https://docs.google.com/forms/d/1mjLhb3JeLrYZsajrglXVJHW99z9viCQ1UJ8l773_Q18/edit) to let us know how you found this training module, what topics you would like to be covered in the ‘wrap-up’ webinar and to register your interest for advanced genomics training (in-person or online).
 
+# Acknowledgements
+
+Many thanks to all those involved in the making of Fundamental 2 for providing feedback on the material and their helpful suggestions and refinements.
+
+**Programme Lead**
+<br/>Prof. Stephen Bentley
+
+**Educators**
+<br/>Narender Kumar, Kate Mellor, Stephanie W. Lo, Victoria Carr, Uzma Khan, Jolynne Mokaya, Ana Ferreira, Gemma Murray.
+
+**Contributors**
+<br/>Narender Kumar, Kate Mellor, Christine Boinett, Victoria Carr, Nil Shchelov, Jolynne Mokaya, Ana Ferreira, John Lees, Stephanie W. Lo, Stephen Bentley, members of the [Bentley Group](https://bentleygroup.sanger.ac.uk/#team), members of the [Centre for Genomic Pathogen Surveillance](https://www.pathogensurveillance.net/) and members of the [Pathogen Informatics team](https://www.sanger.ac.uk/science/groups/pathogen-informatics).
+
+**Funding**
+<br/>The training is provided as part of the [JUNO](https://www.gbsgen.net/) and [GPS2](https://www.pneumogen.net/gps/) projects funded by [The Bill and Melinda Gates Foundation](https://www.gatesfoundation.org/).
+
 </br>&copy; [Wellcome Sanger Institute](https://www.sanger.ac.uk/)

README.md

@@ -16,19 +16,25 @@ Try to avoid embedding HTML in the markdown files if possible.
 ### References
 All references, in links and images, should be relative to the project root, eg. `/F1/microreact.md`.
 
-### Deployment
-Build image:
+## Deploying live website
+1. If the last commit hasn't been tagged, tag the repo following versioning convention in current tags e.g. `v0.1.13`
+
+2. Build image using tag version (without the v e.g. `0.1.13`). The `<docker user>` must be the name of the docker repository you plan to use
+
 ```
 cd bactgen-training-app
 docker build -t <docker user>/bactgen-training-app:<version> .
 ```
 
-Push image:
+3. Push image to repository of `<docker user>`
+
 ```
 docker push <docker user>/bactgen-training-app:<version>
 ```
 
-Deploy the website to the server (you must have ssh access to the host address):
+4. Deploy the website to the server.
+You must have ssh access to the host address. If you do not then the recent contributors of this repo that still work at the Sanger should already have access. You can ask them to add your public ssh key. Additional information on remote users and host addresses can be found [here](http://mediawiki.internal.sanger.ac.uk/index.php/Websites_managed_for_team_284_(Stephen_Bentley%27s_group)).
+
 ```
 ./deploy.sh <version> <remote user> <deployment host address> <docker user>
 ```