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Mice Protein Expression

Protein Expression classification models are frequently viewed not only as a difficult task, but also as a classification problem that, in some cases, requires a trade-off between accuracy and efficiency in analysis validation due to the large amount of data available. Expression levels of 77 proteins measured in the cerebral cortex of 8 classes of control and Down syndrome mice exposed to context fear conditioning, a task used to assess associative learning. The aim is to identify subsets of proteins that are discriminant between the classes. Basically, this is multi-class classification problem

Project Demo

https://www.youtube.com/watch?v=0Rt9RcMMqow

Application link

https://mice-protein--expression.herokuapp.com/

Documents

HLD/LLD/Architecture/DPR : https://drive.google.com/drive/folders/18ZT7pDXsBhl_65RpkLonHWmTa41LBcNj?usp=sharing

Database

MongoDB database has been used to store training, prediction dataset and for logging

🛠️ Requirements

  • python 3.x
  • Flask
  • pandas
  • mysql-connector-python
  • kneed
  • scikit-learn
  • xgboost

Contributor

  • Sayan Saha

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