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SIB Swiss Institute of Bioinformatics

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  1. training-collection training-collection Public

    Collection of bioinformatics training materials

    Python 992 184

  2. single-cell-training single-cell-training Public

    SIB course on single cell transcriptomics by mostly using the Seurat pipeline

    R 78 36

  3. intermediate-python-training intermediate-python-training Public

    Jupyter Notebook 63 27

  4. first-steps-with-python-training first-steps-with-python-training Public

    repository of the 3-day course "First steps with Python in Life Sciences" from SIB-training

    Jupyter Notebook 56 17

  5. first-steps-with-R-training first-steps-with-R-training Public

    repository of the 2-day course "First steps with R in Life Sciences" from SIB-training

    R 44 12

  6. intro-machine-learning-training intro-machine-learning-training Public

    Jupyter Notebook 38 15

Repositories

Showing 10 of 124 repositories
  • sib-swiss/fair-training-guide’s past year of commit activity
    0 CC-BY-4.0 0 1 0 Updated Jan 10, 2025
  • kgsteward Public

    Knowledge Graph Steward - Command line tool to help manage RDF store

    sib-swiss/kgsteward’s past year of commit activity
    Python 5 GPL-3.0 2 0 0 Updated Jan 10, 2025
  • sib-swiss/Introduction-to-statistics-with-R’s past year of commit activity
    4 2 1 3 Updated Jan 10, 2025
  • glittr-stats Public

    General statistics of Glittr.org. Comes with the manuscript.

    sib-swiss/glittr-stats’s past year of commit activity
    PostScript 1 0 0 0 Updated Jan 10, 2025
  • AWS-docker Public

    Set of commands to deploy docker containers on an AWS instance

    sib-swiss/AWS-docker’s past year of commit activity
    Shell 5 MIT 1 0 0 Updated Jan 9, 2025
  • enrichment-analysis-training Public

    Course material for Enrichment analysis course by SIB

    sib-swiss/enrichment-analysis-training’s past year of commit activity
    8 8 5 0 Updated Jan 7, 2025
  • sib-swiss/intermediate-python-training’s past year of commit activity
    Jupyter Notebook 63 CC-BY-4.0 27 4 0 Updated Jan 6, 2025
  • first-steps-with-python-training Public

    repository of the 3-day course "First steps with Python in Life Sciences" from SIB-training

    sib-swiss/first-steps-with-python-training’s past year of commit activity
    Jupyter Notebook 56 CC-BY-4.0 17 6 0 Updated Jan 6, 2025
  • sparql-llm Public

    🦜✨ Chat system and reusable components to improve LLMs capabilities when generating SPARQL queries

    sib-swiss/sparql-llm’s past year of commit activity
    Jupyter Notebook 13 MIT 1 1 0 Updated Jan 6, 2025
  • sib-swiss/single-cell-python-training’s past year of commit activity
    HTML 3 CC-BY-4.0 0 0 0 Updated Jan 5, 2025