Removing 'write_knn_indices' arg

theislab · Apr 7, 2024 · 1953452 · 1953452
1 parent b2f31b3
commit 1953452
Showing 1 changed file with 1 addition and 1 deletion.
diff --git a/scvelo/preprocessing/neighbors.py b/scvelo/preprocessing/neighbors.py
@@ -37,7 +37,7 @@ def _get_scanpy_neighbors(adata: AnnData, **kwargs):
     with warnings.catch_warnings():  # ignore numba warning (umap/issues/252)
         warnings.simplefilter("ignore")
         neighbors = Neighbors(adata)
-        neighbors.compute_neighbors(write_knn_indices=True, **kwargs)
+        neighbors.compute_neighbors(**kwargs)
     logg.switch_verbosity("on", module="scanpy")
 
     return neighbors