A Snakemake workflow and MrBiomics module for performing and visualizing differential (expression) analyses (DEA) on NGS data powered by the R package limma.

A quick recap of widely used differential analyses methods in R for RNA-seq experiments

RNA-seq alignment and analysis pipeline

This project provides a reproducible workflow for bulk RNA-Seq data analysis, including preprocessing, quality control, differential expression analysis, and visualization using edgeR and limma-voom. It focuses on evaluating pipeline performance while analyzing RNA-Seq data from a case study on mouse mammary gland gene expression.

RNA-Seq Data Analysis in R: From Raw Counts to Differential Expression Analysis

Example code supporting immunology research