Pinned Loading

1. ClusterMap ClusterMap Public

   ClusterMap for multi-scale clustering analysis of spatial gene expression

   Jupyter Notebook 43 11

2. spin spin Public

   SPatial INtegration of spatially resolved transcriptomics datasets

   Jupyter Notebook 13

3. CAST CAST Public

   CAST package

   Python 26 3

4. starfinder starfinder Public

   Customized snakemake workflow for computational image processing

   Jupyter Notebook 1

5. harmonics harmonics Public

   Harmonic analysis of spatial transcriptomics data

   Python 1

6. FuseMap FuseMap Public

   FuseMap: Integrate spatial transcripomics with universal gene, cell, and tissue embeddings.

   Jupyter Notebook 2 1