add threashold to shrinkage parameters using gig posterior #408
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| # Workflow derived from https://github.com/r-lib/actions/tree/master/examples | |
| # Need help debugging build failures? Start at https://github.com/r-lib/actions#where-to-find-help | |
| on: | |
| push: | |
| branches: [main, master, 'hotfix/*', 'release/*', develop, 'feature/*-withci'] | |
| pull_request: | |
| branches: [main, master, 'hotfix/*', 'release/*', develop] | |
| name: R-CMD-check | |
| jobs: | |
| R-CMD-check: | |
| runs-on: ${{ matrix.config.os }} | |
| name: ${{ matrix.config.os }} (${{ matrix.config.r }}) | |
| strategy: | |
| fail-fast: false | |
| matrix: | |
| config: | |
| - {os: macOS-latest, r: 'release'} | |
| - {os: windows-latest, r: 'release'} | |
| - {os: windows-latest, r: 'oldrel-3'} # change to oldrel-3 in Spring 2025 | |
| - {os: ubuntu-latest, r: 'devel', http-user-agent: 'release'} | |
| - {os: ubuntu-latest, r: 'release'} | |
| - {os: ubuntu-latest, r: 'oldrel-1'} | |
| - {os: ubuntu-latest, r: 'oldrel-2'} | |
| - {os: ubuntu-latest, r: 'oldrel-3'} | |
| # add oldrel-4 in Spring 2025 | |
| # - {os: ubuntu-latest, r: 'oldrel-4'} | |
| env: | |
| GITHUB_PAT: ${{ secrets.GITHUB_TOKEN }} | |
| R_KEEP_PKG_SOURCE: yes | |
| steps: | |
| - uses: actions/checkout@v4 | |
| - uses: r-lib/actions/setup-pandoc@v2 | |
| - uses: r-lib/actions/setup-r@v2 | |
| with: | |
| r-version: ${{ matrix.config.r }} | |
| http-user-agent: ${{ matrix.config.http-user-agent }} | |
| use-public-rspm: true | |
| - uses: r-lib/actions/setup-r-dependencies@v2 | |
| with: | |
| extra-packages: any::rcmdcheck | |
| needs: check | |
| # do not build vignettes in github actions check and ignore warnings | |
| - uses: r-lib/actions/check-r-package@v2 | |
| if: "!startsWith(github.ref, 'refs/heads/release/') && !startsWith(github.ref, 'refs/heads/hotfix/')" | |
| with: | |
| args: 'c("--no-manual", "--as-cran", "--no-vignettes", "--no-build-vignettes", "--ignore-vignettes", "--no-examples")' | |
| build_args: 'c("--no-manual", "--no-build-vignettes")' | |
| error-on: '"warning"' | |
| check-dir: '"check"' | |
| upload-snapshots: false | |
| upload-results: 'never' | |
| - name: Run check for CRAN | |
| uses: r-lib/actions/check-r-package@v2 | |
| if: startsWith(github.ref, 'refs/heads/release/') || startsWith(github.ref, 'refs/heads/hotfix/') | |
| with: | |
| args: 'c("--no-manual", "--as-cran")' | |
| build_args: 'c("--no-manual")' | |
| error-on: '"warning"' | |
| check-dir: '"check"' | |
| upload-snapshots: false | |
| upload-results: false | |
| env: | |
| _R_CHECK_CRAN_INCOMING_REMOTE_: true | |
| _R_CHECK_CRAN_INCOMING_: true | |
| # do not upload artifact until changing to public repo | |
| # When public repo -> uncomment below | |
| # - name: Upload check results | |
| # if: failure() | |
| # uses: actions/upload-artifact@main | |
| # with: | |
| # name: ${{ runner.os }}-r${{ matrix.config.r }}-results | |
| # path: check |