Adding median_first_quart_third_quart to pairwise_test_cont() #102
This file contains bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
| # Workflow derived from https://github.com/r-lib/actions/tree/v2/examples | |
| # Need help debugging build failures? Start at https://github.com/r-lib/actions#where-to-find-help | |
| on: | |
| push: | |
| branches: [main, master, develop] | |
| pull_request: | |
| branches: [main, master, develop] | |
| name: R-CMD-check | |
| jobs: | |
| R-CMD-check: | |
| runs-on: ${{ matrix.config.os }} | |
| name: ${{ matrix.config.os }} (${{ matrix.config.r }}) | |
| strategy: | |
| fail-fast: false | |
| matrix: | |
| config: | |
| - {os: macos-latest, r: 'release'} | |
| - {os: windows-latest, r: 'release'} | |
| - {os: ubuntu-latest, r: 'devel', http-user-agent: 'release'} | |
| - {os: ubuntu-latest, r: 'release'} | |
| - {os: ubuntu-latest, r: 'oldrel-1'} | |
| - {os: ubuntu-latest, r: '4.0.4', pandoc-version: '2.11.4'} | |
| env: | |
| GITHUB_PAT: ${{ secrets.GITHUB_TOKEN }} | |
| R_KEEP_PKG_SOURCE: yes | |
| steps: | |
| - uses: actions/checkout@v4 | |
| - name: Setup statsrv pandoc | |
| if: ${{ matrix.config.r == '4.0.4' }} | |
| uses: r-lib/actions/setup-pandoc@v2 | |
| with: | |
| pandoc-version: ${{ matrix.config.pandoc-version }} | |
| - name: Setup default pandoc | |
| if: ${{ matrix.config.r != '4.0.4' }} | |
| uses: r-lib/actions/setup-pandoc@v2 | |
| - name: Set up tinytex | |
| uses: r-lib/actions/setup-tinytex@v2 | |
| - name: Preinstall required latex packages | |
| run: > | |
| tlmgr install | |
| lastpage morefloats parskip pdflscape textpos multirow lipsum | |
| fancyhdr colortbl soul setspace relsize makecell threeparttable | |
| threeparttablex environ trimspaces | |
| - uses: r-lib/actions/setup-r@v2 | |
| with: | |
| r-version: ${{ matrix.config.r }} | |
| http-user-agent: ${{ matrix.config.http-user-agent }} | |
| use-public-rspm: true | |
| - name: Install statsrv packages | |
| if: ${{ matrix.config.r == '4.0.4' }} | |
| run: | | |
| R -q -e 'utils::install.packages("remotes")' | |
| R -q -e 'remotes::install_version("Hmisc", "4.5-0")' | |
| R -q -e 'remotes::install_github("FredHutch/VISCfunctions", dependencies = TRUE)' | |
| R -q -e 'utils::install.packages("rcmdcheck")' | |
| - uses: r-lib/actions/setup-r-dependencies@v2 | |
| if: ${{ matrix.config.r != '4.0.4' }} | |
| with: | |
| extra-packages: any::rcmdcheck | |
| needs: check | |
| - uses: r-lib/actions/check-r-package@v2 | |
| with: | |
| upload-snapshots: true | |
| build_args: 'c("--no-manual","--compact-vignettes=gs+qpdf")' |