Fix command-line interface imports. Increment t2t version

ccb-hms · Aug 15, 2023 · 8e85ee7 · 8e85ee7
1 parent 6845220
commit 8e85ee7
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Showing 2 changed files with 8 additions and 6 deletions.
diff --git a/text2term/__main__.py b/text2term/__main__.py
@@ -1,7 +1,8 @@
 import argparse
 import os
 import sys
-from t2t import map_file, cache_ontology, cache_exists
+from t2t import map_terms, cache_ontology
+from onto_cache import cache_exists
 from mapper import Mapper
 
 if __name__ == "__main__":
@@ -56,7 +57,8 @@
     if acronym != "":
         cache_ontology(target, acronym, iris)
         target = acronym
-    map_file(arguments.source, target, output_file=arguments.output, csv_columns=csv_columns,
-                         excl_deprecated=arguments.excl_deprecated, mapper=mapper, max_mappings=arguments.top_mappings,
-                         min_score=arguments.min_score, base_iris=iris, save_graphs=arguments.save_term_graphs,
-                         save_mappings=True, separator=arguments.separator, use_cache=cache_exists(target), term_type=arguments.term_type)
+    map_terms(arguments.source, target, output_file=arguments.output, csv_columns=csv_columns,
+              excl_deprecated=arguments.excl_deprecated, mapper=mapper, max_mappings=arguments.top_mappings,
+              min_score=arguments.min_score, base_iris=iris, save_graphs=arguments.save_term_graphs,
+              save_mappings=True, separator=arguments.separator, use_cache=cache_exists(target),
+              term_type=arguments.term_type)
diff --git a/text2term/config.py b/text2term/config.py
@@ -1 +1 @@
-VERSION = "3.0.1"
+VERSION = "3.0.2"