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Fastqfilter #13648

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Fastqfilter

Fastqfilter #13648

Run time

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Job Run time
pre-commit
13s
prettier
54s
editorconfig
17s
nf-test-changes
1m 25s
pytest-changes
55s
pytest
0s
nf-core-lint-modules (fastq_fastqc_umitools_fastp)
1m 44s
nf-core-lint-modules (fastq_fastqc_umitools_trimgalore)
45s
nf-core-lint-modules (goleft/indexcov)
1m 57s
nf-core-lint-modules (picard/positionbaseddownsamplesam)
2m 0s
nf-core-lint-modules (arcashla/extract)
1s
nf-core-lint-modules (arriba/download)
1m 55s
nf-core-lint-modules (adapterremovalfixprefix)
1m 57s
nf-core-lint-modules (vt/decompose)
2m 1s
nf-core-lint-modules (multiqc)
1m 57s
nf-core-lint-modules (vsearch/usearchglobal)
2m 11s
nf-core-lint-modules (fastqc)
1m 56s
nf-core-lint-modules (verifybamid/verifybamid)
2m 8s
nf-core-lint-modules (vsearch/fastqfilter)
2m 3s
nf-core-lint-modules (vcflib/vcfuniq)
1m 58s
nf-test (modules/nf-core/goleft/indexcov, conda)
3m 23s
nf-test (modules/nf-core/goleft/indexcov, docker_self_hosted)
2m 9s
nf-test (modules/nf-core/goleft/indexcov, singularity)
1m 51s
nf-test (modules/nf-core/picard/positionbaseddownsamplesam, conda)
3m 10s
nf-test (modules/nf-core/picard/positionbaseddownsamplesam, docker_self_hosted)
2m 39s
nf-test (modules/nf-core/picard/positionbaseddownsamplesam, singularity)
2m 42s
nf-test (modules/nf-core/arcashla/extract, conda)
4m 5s
nf-test (modules/nf-core/arcashla/extract, docker_self_hosted)
2m 21s
nf-test (modules/nf-core/arcashla/extract, singularity)
3m 2s
nf-test (modules/nf-core/arriba/download, conda)
3m 58s
nf-test (modules/nf-core/arriba/download, docker_self_hosted)
4m 1s
nf-test (modules/nf-core/arriba/download, singularity)
4m 4s
nf-test (modules/nf-core/adapterremovalfixprefix, conda)
4m 27s
nf-test (modules/nf-core/adapterremovalfixprefix, docker_self_hosted)
2m 35s
nf-test (modules/nf-core/adapterremovalfixprefix, singularity)
3m 51s
nf-test (subworkflows/nf-core/fastq_fastqc_umitools_fastp, conda)
1m 29s
nf-test (subworkflows/nf-core/fastq_fastqc_umitools_fastp, docker_self_hosted)
1m 53s
nf-test (subworkflows/nf-core/fastq_fastqc_umitools_fastp, singularity)
1m 53s
nf-test (modules/nf-core/vt/decompose, docker_self_hosted)
1m 53s
nf-test (modules/nf-core/vt/decompose, singularity)
2m 6s
nf-test (modules/nf-core/multiqc, conda)
3m 20s
nf-test (modules/nf-core/multiqc, docker_self_hosted)
3m 17s
nf-test (modules/nf-core/multiqc, singularity)
3m 14s
nf-test (modules/nf-core/vsearch/usearchglobal, conda)
2m 21s
nf-test (modules/nf-core/vsearch/usearchglobal, docker_self_hosted)
2m 43s
nf-test (modules/nf-core/vsearch/usearchglobal, singularity)
2m 21s
nf-test (subworkflows/nf-core/fastq_fastqc_umitools_trimgalore, conda)
1m 52s
nf-test (subworkflows/nf-core/fastq_fastqc_umitools_trimgalore, docker_self_hosted)
1m 45s
nf-test (subworkflows/nf-core/fastq_fastqc_umitools_trimgalore, singularity)
1m 45s
nf-test (modules/nf-core/fastqc, conda)
3m 55s
nf-test (modules/nf-core/fastqc, docker_self_hosted)
3m 45s
nf-test (modules/nf-core/fastqc, singularity)
3m 56s
nf-test (modules/nf-core/verifybamid/verifybamid, conda)
2m 39s
nf-test (modules/nf-core/verifybamid/verifybamid, docker_self_hosted)
58s
nf-test (modules/nf-core/verifybamid/verifybamid, singularity)
1m 50s
nf-test (modules/nf-core/vsearch/fastqfilter, conda)
2m 23s
nf-test (modules/nf-core/vsearch/fastqfilter, docker_self_hosted)
1m 50s
nf-test (modules/nf-core/vsearch/fastqfilter, singularity)
1m 29s
nf-test (modules/nf-core/vcflib/vcfuniq, conda)
2m 49s
nf-test (modules/nf-core/vcflib/vcfuniq, docker_self_hosted)
1m 4s
nf-test (modules/nf-core/vcflib/vcfuniq, singularity)
2m 16s
confirm-pass
1s
2h 17m 22s