[c++] Integrate `SOMAColumn`: Update domain accessors inside `SOMAArray`, part 2#3407

Merged

XanthosXanthopoulos merged 28 commits intomainfrom xan/sc-59427/soma-column-somarray-integration

Jan 28, 2025

+461-310

Commits on Jan 23, 2025

SOMAColumn abstract class definition
XanthosXanthopoulos
committed
Remove fmt::format
XanthosXanthopoulos
committed
Remove unneeded methods and member variables
XanthosXanthopoulos
committed
Add concrete class wrapper for TileDB dimension
XanthosXanthopoulos
committed
Add minimal testing for dimensions
XanthosXanthopoulos
committed
Replace string_view with string when returning column name, add current domain checks, replace vector with span when selecting points
XanthosXanthopoulos
committed
Add concrete class wrapper for TileDB attribute
XanthosXanthopoulos
committed
Update CMake files
XanthosXanthopoulos
committed
Add minimal testing for dimensions
XanthosXanthopoulos
committed
Misc fixes
XanthosXanthopoulos
committed
Add read test case
XanthosXanthopoulos
committed
Remove current_domain flag
XanthosXanthopoulos
committed
Do not export soma column [skip ci]
XanthosXanthopoulos
committed
Migrate array creation to SOMAColumn
XanthosXanthopoulos
committed
Misc fixes
XanthosXanthopoulos
committed
[c++] SOMAColumn serialization/deserialization (#3599 )
XanthosXanthopoulos
committed
[c++] Make SOMAColumn metadata required only for GeometryDataframe (#3621 )
XanthosXanthopoulos
committed
Fill SOMAColumn info on array open
XanthosXanthopoulos
committed
MIgrate domain access methods to use SOMAColumns
XanthosXanthopoulos
committed
Add optional non empty domain method
XanthosXanthopoulos
committed
Replace optional non empty domain with the SOMAColumn implementation, update python bindings
XanthosXanthopoulos
committed
Add template-specialization guards
XanthosXanthopoulos
committed
Remove unsupported dimension datatypes
XanthosXanthopoulos
committed
Update old version of fill_metadata_cache
XanthosXanthopoulos
committed
Filter SOMAColumns when iterating to construct the domain
XanthosXanthopoulos
committed
Fix serialized columns order
XanthosXanthopoulos
committed

Commits on Jan 24, 2025

log type [skip ci]
XanthosXanthopoulos
committed
Specify LIBCPP_TYPEINFO_COMPARISON_IMPLEMENTATION for clang
XanthosXanthopoulos
committed

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[c++] Integrate `SOMAColumn`: Update domain accessors inside `SOMAArray`, part 2#3407

Commits on Jan 23, 2025

SOMAColumn abstract class definition

Remove fmt::format

Remove unneeded methods and member variables

Add concrete class wrapper for TileDB dimension

Add minimal testing for dimensions

Replace string_view with string when returning column name, add current domain checks, replace vector with span when selecting points

Add concrete class wrapper for TileDB attribute

Update CMake files

Add minimal testing for dimensions

Misc fixes

Add read test case

Remove current_domain flag

Do not export soma column [skip ci]

Migrate array creation to SOMAColumn

Misc fixes

[c++] SOMAColumn serialization/deserialization (#3599 )

[c++] Make `SOMAColumn` metadata required only for `GeometryDataframe` (#3621 )

Fill SOMAColumn info on array open

MIgrate domain access methods to use SOMAColumns

Add optional non empty domain method

Replace optional non empty domain with the SOMAColumn implementation, update python bindings

Add template-specialization guards

Remove unsupported dimension datatypes

Update old version of `fill_metadata_cache`

Filter SOMAColumns when iterating to construct the domain

Fix serialized columns order

Commits on Jan 24, 2025

log type [skip ci]

Specify LIBCPP_TYPEINFO_COMPARISON_IMPLEMENTATION for clang