Wally: Visualization of aligned sequencing reads and contigs
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Dec 20, 2024 - C++
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sequencing-data
Here are 17 public repositories matching this topic...
An open-source pathogen sequence database dedicated to equitable sharing, transparent governance, & empowering global public health.
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Dec 23, 2024 - MDX
Flexible analysis of high-content CRISPR screening
crispr-analysis crispr phenotypes crispr-cas9 functional-genomics ngs-analysis perturbation-screen sequencing-data crispr-cas12
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Jan 4, 2025 - Python
deepBreaks , a computational method, aims to identify important changes in association with the phenotype of interest using multi-alignment sequencing data from a population.
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Aug 15, 2024 - Jupyter Notebook
🌳 Human ancestry inference from genomic data
genome ancestry snv genome-assembly genomic-data-analysis ancestrydna genomic-data ancestry-inference sequencing-data snv-call
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Dec 3, 2024 - Python
R script for fast and streamlined Radiality Calculation from GPSeq data.
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Nov 30, 2021 - R
Repository to discuss SARS-CoV-2 sequence quality
bioinformatics quality-control genomics sequencing-error sars-cov-2 virus-evolution sequencing-data sars-cov-2-variants
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Jan 21, 2024
Frontend web application for wally to visualize aligned sequencing reads
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Sep 26, 2024 - HTML
Stock Price Forcasting Using LSTM
machine-learning deep-learning business-intelligence stock-price-prediction lstm-neural-networks finance-management timeseries-forecasting sequencing-data
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Jun 28, 2024
datastructure rustlang faster iteration for genome, short and long reads
bioinformatics rust-lang sequence-classification rust-crate sequencing-data genome-classification genome-informatics
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Nov 10, 2024 - Rust
Remove adaptors from short-read bisulfite sequencing data (coded in rust)
sequencer sequencing sequence-alignment sequencing-data sequencing-reads sequencing-data-analysis sequencing-adapters
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Aug 21, 2024 - Rust
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Aug 31, 2023 - Python
a streamlit application for graphical analyisis of pacbiohifi reads
bioinformatics pacbio genome-analysis bioinformatics-analysis pacbio-data sequencing-data pacbio-sequencing pacbio-hifi-sequencing-reads pacbiohifi sequencing-analysis
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Sep 12, 2024 - Python
rust-fastp-clip
bioinformatics genome-sequencing genome-analysis sequence-classification illumina-sequencing sequencing-data
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Nov 21, 2024 - Rust
A Snakemake pipeline for copy number variant calling without normal tissue samples
bioinformatics snakemake conda cnv bwa panels cna mutect2 targeted-sequencing sequencing-data cnvkit copynumbervariation purecn
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Dec 18, 2024 - Python
Scientific workflow engine designed for simplicity & scalability. Trivially transition between one off use cases to massive scale production environments
cloud bioinformatics genomics genome sequencing pipelines dna fasta q workflows illumina ncbi dna-sequences whole-genome-sequencing ncbi-blast basespace sanger-sequencing sequencing-data yfull
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Jun 24, 2023 - Scala
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