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17 Open 11 Closed
17 Open 11 Closed
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Issues list

statistical method for testing degree of clustering/distance between groups of TCRs?
#45 opened Apr 8, 2024 by dxl3742
Apply tcr-dist on amino acid sequences
#44 opened Jul 18, 2023 by rx-li
1
Losing Clones
#43 opened Jun 12, 2023 by TheRaspberryFox
Issue with run_basic_analysis
#42 opened Sep 8, 2022 by TejasMenon
usage with mixcr files
#41 opened Feb 7, 2022 by guillemsanchezsanchez1996
8
Bad CPU type
#38 opened May 29, 2020 by poorvam
4
text format cluster output for make_tall_trees.py
#36 opened Apr 8, 2020 by BioLaoXu
2
How to pair the alpha and beta chain reads from one TCR
#33 opened Jul 2, 2019 by zhangbaifeng
AssertionError
#32 opened Jun 30, 2019 by XYZuo
4
How to use tcr-dist with only V gene-level information?
#31 opened May 10, 2019 by gchoonoo
6
Limitations in detecting out of frame TCRs
#20 opened Aug 31, 2017 by jeremycfd
3
Track the clonality of out of frame CDR3s
#19 opened Aug 31, 2017 by jeremycfd
2
Limited functionality of --no_probabilities
#12 opened Jul 28, 2017 by jeremycfd
Investigate redesigning of filename/path lengths
#9 opened Jul 19, 2017 by jeremycfd
Reduce and annotate the required fields in the clones file
#3 opened Mar 18, 2017 by phbradley
Allow for missing quality strings, and also ASCII num->char formatted quality strings
#2 opened Mar 18, 2017 by phbradley
Catch special-case failures caused by only having one epitope, subject, etc
#1 opened Mar 18, 2017 by phbradley
ProTip! What’s not been updated in a month: updated:<2024-12-10.